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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918027.1_cds_XP_016467552.1_60288
CDS Infomation

[gene=LOC107790163] [db_xref=GeneID:107790163] [protein=protein STRUBBELIG-RECEPTOR FAMILY 3-like] [protein_id=XP_016467552.1] [location=join(30425..30530,31432..31561,31643..31714,31832..31872,31913..32003,32094..32165,32243..32308,32408..32473,33837..34213,34826..35220,36058..36326,36834..36972,37477..37613,37705..37861,39139..39237)] [gbkey=CDS]
Sequence

ATGGATGAGAAGAGATTTGTTGTGTGCTGCTTGAATTTGGAGATTTTGGTGTGGATTCTA
TTAGTTTTTGCTGTTCAACATTCAGATGAAACTGACCCTGGAGATGTTGCTGCAATTAAT
GGCTTATATGCTGCTCTGGGATCGCCGTCCCTTCCGGGCTGGGGTACTGTTGGTGGAGAC
CCATGTAATGGACTTTGGCAAGGGGTCATATGCGAAAATACAAATATAGTAACGATTCGA
CTCAATGCTGCTAACTTGGGTGGTGAACTAGGGGATAATTTAGGCTCATTTTCTTCTCTC
AAAACATTAGATCTGAGCAACAACCATATCGGCGGAAGCATTCCGTCCNGTATTTCTCTG
TGTGTCAGGTCTCTTAATGGCAACCATTTGACTGGAGGAATTCCTGATTCGTTTCACGGC
CTCACGGCTTTGGTCAATCTTGATTTGTCAGGTAACAGTTTAAGTGGATCATTGCCACCA
TCGCTAGGAAGTTTGTCTTCCTTGGCTACTCTACATTTGCAGAATAATCAGCTTTCTGGA
ACTCTGGATGTTTTGCAGGATCTTCCGCTTGCAGATTTAAATGTGGAAAACAACCTGTTT
TCTGGGCCCATACCTCAGAAGTTGTTCTCTATTCCCAATTTCAAAAAAGATGGAAATCCT
TTCGACGGTAGTATTGCTCCTTTACCTCCACCAAATTCATCAATAACACCTCTTTCTGCG
CCACCCTTTTCTGGGTCTCCAACTTCAGCACAGACACCACCAGCAGCATCTGCAGAGTCA
AGTTCAACAGGAAGCAAAAAGTCTTTATCTGTTAAAAGGGTGGTCTGGATATCAATTGCA
GCAGTTTTGACATTTATAATATTGGTTTTAGCGATCCTGCTCATTCTGCCGAGGTGCCTC
AGGAAATGGCATGAAACTCAAAGAACCCCCAAACAACATGAAATAGCTCCTTATGTGGGT
GCCAGAGAGAATCCCGGAGATAGTGGTTCATTAGTCCAACCTGGCCGTGACATAGAGAAA
GCTCCTCTAGTTGTGAAGCCAAAAGAAAAACAACCAAGAAGACCGGCTCCCATTCTGAAG
CCACCGCATGAGCAGGAGGTAAATGTGCTAACCACGAGTGCACTGCCAAAGAAGGATAAT
AATGATATGAACCCTAGCAGATTTGATATTGATTTGATGCCACCACCTCCACATCCTCCT
CTGCCAACTCTTCCACACGAGAGAGTTATTGTCAAGCCAATTGTACCTGCTGAAGATACC
ACAGTGAAGCCTCTAACCAGGCCGGTTCCACTAACTTTTGTGAAATCTTACACAATTGCA
TCACTTCAGCAATATACCAATAGCTTTTCTCAAGATAATCTGTTGGGATCAGGAATGCTT
GGTAGTGTATACAGAGCAGAGCTTCCGAATGGAAAGTTGCTTGCTGTCAAAAAGCTTGAC
AAAAGAGTTTGCAGTCAACAAAAGGACGAGTTTCTTGACCTAGTAAACAACATCGACATA
ATTCGTCATGCTAATGTTGTTGAGCTGATGGGGTATTGTGCAGAGCATGGTCAAAGGCTT
CTGGTCCATGAGTATTGCACTAATGGGACACTACAGGATGCACTTCATTCTGACGATGAA
TTTAAGAAACAACTTTCGTGGAATACTCGAATCAGGATGGCTCTTGGAGCTGCAAGAGCT
TTGGAGTACCTCCATGAAGTCTGCGAGCCACCTATTATTCACAAAAACTTCAAATCGGCC
AATCTTCTGCTTGATGATGAGTTGGCTGTACATGTTTCAGATTGTGGTTTAGCTCCATTG
CTATCGTCTGGTGCTGCGAGTCAGTTGTCGGGACAACTTCTCACAACCTATGGCTACAGT
GCTCCAGAATTTGAGTCAGGGATTTATACTTCCCAAAGTGATGTTTACAGTTTTGGCGTA
GTGATGTTAGAACTATTAACAGGCAGAATGTCATTTGATCGGACAAGGACTCGAGGAGAG
CAGTTCTTGGTCAGATGGGCAATCCCTCAGCTACACGATATTGATGCCTTGACAAAGATG
GTTGATCCTTCTCTCAATGGAAAATACCCCATTAAATCATTATCACACTTCGCTGACATA
ATTTCTCGCTGTGTTCAGCATGAGCCAGAATTCAGACCACCAATGTCAGAAGTTGTTCAG
GACCTCATTCAAATGATAAAAAGAGAACCTAACAATAGATTGCATGGCGAATTATGA

Peptide Sequence

PEP ID

XP_016467552.1
PEP Infomation

PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Nicotiana tabacum]
Sequence

MDEKRFVVCCLNLEILVWILLVFAVQHSDETDPGDVAAINGLYAALGSPSLPGWGTVGGD
PCNGLWQGVICENTNIVTIRLNAANLGGELGDNLGSFSSLKTLDLSNNHIGGSIPSXISL
CVRSLNGNHLTGGIPDSFHGLTALVNLDLSGNSLSGSLPPSLGSLSSLATLHLQNNQLSG
TLDVLQDLPLADLNVENNLFSGPIPQKLFSIPNFKKDGNPFDGSIAPLPPPNSSITPLSA
PPFSGSPTSAQTPPAASAESSSTGSKKSLSVKRVVWISIAAVLTFIILVLAILLILPRCL
RKWHETQRTPKQHEIAPYVGARENPGDSGSLVQPGRDIEKAPLVVKPKEKQPRRPAPILK
PPHEQEVNVLTTSALPKKDNNDMNPSRFDIDLMPPPPHPPLPTLPHERVIVKPIVPAEDT
TVKPLTRPVPLTFVKSYTIASLQQYTNSFSQDNLLGSGMLGSVYRAELPNGKLLAVKKLD
KRVCSQQKDEFLDLVNNIDIIRHANVVELMGYCAEHGQRLLVHEYCTNGTLQDALHSDDE
FKKQLSWNTRIRMALGAARALEYLHEVCEPPIIHKNFKSANLLLDDELAVHVSDCGLAPL
LSSGAASQLSGQLLTTYGYSAPEFESGIYTSQSDVYSFGVVMLELLTGRMSFDRTRTRGE
QFLVRWAIPQLHDIDALTKMVDPSLNGKYPIKSLSHFADIISRCVQHEPEFRPPMSEVVQ
DLIQMIKREPNNRLHGEL

Transcript Sequence

Gene sequence data has not been registered.